Insertion junction: CLIP2.019385_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019385
Chromosome:chromosome 16
Location:7517806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682475 (1 of 1) PTHR34496//PTHR34496:SF1 - FAMILY NOT NAMED // GLCNAC TRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCAGTGACCGCCAGTTCCTGTCCGCCTTCCTTTTCATCATCGCCTGC
Internal bar code:CACCAGTTAGCGTGTTTCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGAAGTTGTAGCCAGGAC
Suggested primer 2:GGCTCTCGGCTGATACTCAC