Insertion junction: CLIP2.019388_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019388
Chromosome:chromosome 7
Location:4552318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344050 (1 of 1) K14555 - U3 small nucleolar RNA-associated protein 13 (UTP13, TBL3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGCCCTTGCCGCCGGCAGCCGCCGGCGTTGCTGCCGGCTTGCCGTT
Internal bar code:TTTATGATATAGTGAGAATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGATGAGGAGGAGGGTGT
Suggested primer 2:CACTGCCTGCAAACAGTCAC