Insertion junction: CLIP2.019393_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019393
Chromosome:chromosome 1
Location:2837130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017600 PQQ2 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat; Putative quinoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATCCACCTGAGAGCTTGCTGTGTGCCAACAGTCAATGCTGGCGCCAC
Internal bar code:TGTACAAACTACACTATCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4193
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTGCGTGGTTGGAGTG
Suggested primer 2:AGGCCAGTTCCCCTATAGCA