Insertion junction: CLIP2.019395_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019395
Chromosome:chromosome 6
Location:2409796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268650 FAP279 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Flagellar Associated Protein 279 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCATTTCCACGGGAGCACTGGCCGTACAAGGCCTTGGGTGACACGGAG
Internal bar code:ATGGGAAATGACCACGTTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:690
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCGCATGAACAGGTAG
Suggested primer 2:CCATCCTTTGATGCATGGCG