Insertion junction: CLIP2.019408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019408
Chromosome:chromosome 1
Location:5805913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041583 (1 of 2) PF03366 - YEATS family (YEATS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGGCACTGGCCGGCGGCACAGCGGGCACGTCACAGCCGCACTGC
Internal bar code:TTTTGATTGTATGTGCGCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGACCCGGACACATTA
Suggested primer 2:CACACAGACACACGCACTTG