Insertion junction: CLIP2.019411_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019411
Chromosome:chromosome 11
Location:4035858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480650 SDR20 Short-chain dehydrogenase/reductase; (1 of 13) 1.1.1.300 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGGAGGCGGGAGGGCAGCGGGCGGCAGCGCGGCAGGCATGGGTCTA
Internal bar code:GTGCGACTATTTAGATGCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGCATACCCCGTGTTTA
Suggested primer 2:GAGGAGGTAGTGTCCGAGGT