Insertion junction: CLIP2.019411_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019411
Chromosome:chromosome 11
Location:4035862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480650 SDR20 Short-chain dehydrogenase/reductase; (1 of 13) 1.1.1.300 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTCCCTTCATATTTGATACACACCATCCCATGGATGGCTGCTATCT
Internal bar code:TTTGTATGGAGTAAGCGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:84.9057
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGTAGTGTCCGAGGT
Suggested primer 2:GGTGGCATACCCCGTGTTTA