Insertion junction: CLIP2.019423_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019423
Chromosome:chromosome 8
Location:2846669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAAGCGACCTCACCCCTCGTGTCGACTGCGTGCCGGCTGTGCCGGTC
Internal bar code:GGCGAAGCCTCGACCTTTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACCTGGCCGTAAAT
Suggested primer 2:CGTTTGTGGTGCTTGTGAGG