Insertion junction: CLIP2.019423_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019423
Chromosome:chromosome 8
Location:2846677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCACGCACCCCTGCCACAGTCCCGCCACCATGCCGCCCTCCCTTCC
Internal bar code:GGCGAAGCCTCGACCTTTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:61
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGTGGTGCTTGTGAGG
Suggested primer 2:ACACACACCTGGCCGTAAAT