Insertion junction: CLIP2.019433_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019433
Chromosome:chromosome 12
Location:7892694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553450 CNG1 Cyclic-nucleotide gated potassium channel; (1 of 7) PF00027//PF00520 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGGTCCCAGCCAGGTCCCAGCCAGGTCCCCACAAGTCCCGGCGTGTC
Internal bar code:GTTTAATTTCCTCCCAGGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1921
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCGTAACAGTCCTAGCA
Suggested primer 2:GTTATCACCCACTGCCAGCT