Insertion junction: CLIP2.019439_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019439
Chromosome:chromosome 2
Location:5640577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115600 MSC7 Predicted protein with mechanosensitive ion channel domain; (1 of 1) IPR002048//IPR006685//IPR010920//IPR020568 - EF-hand domain // Mechanosensitive ion channel MscS // LSM domain // Ribosomal protein S5 domain 2-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCGCGGGCGCCAGCACAGCACGCAGCAGCAGCCGCGACACGCCCGG
Internal bar code:TTTCACCTAGACTTTTCCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2904
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGATTCAGGTGTTCGTGG
Suggested primer 2:CACCGTCGTCTCAAGCCATA