Insertion junction: CLIP2.019442_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019442
Chromosome:chromosome 12
Location:5128737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801426 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCATGCTGCGTGCCATGGCGCTCTTCATCAAAGCACCTGAACGCTCG
Internal bar code:ATGAAGTCGGATTGTGGGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2269
LEAP-Seq percent confirming:2.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCAAGCAGCACGGTCTT
Suggested primer 2:TCAGGTGTGCCGCAATGTAT