Insertion junction: CLIP2.019453_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019453
Chromosome:chromosome 13
Location:2516713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580050 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAATCCTGCGCCTTCCCTCCCGTGTGCATGCGCCCGAACTCGCATAGG
Internal bar code:TGTACGGAGTGTACCCCTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATCAAGGCACAAACGCA
Suggested primer 2:AAACATTTGGGGTGTACGCG