Insertion junction: CLIP2.019455_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019455
Chromosome:chromosome 7
Location:5482639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351100 THB5,PRX (1 of 1) IPR000104//IPR001486//IPR009050 - Antifreeze protein, type I // Truncated hemoglobin // Globin-like; Truncated hemoglobin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTGCTCCGTGTCATGCGCCCTGCAGTTCATGCGCTACATCATGGGC
Internal bar code:CTGTTAAAAGTATCATCAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCCCAGTATCTCAGAC
Suggested primer 2:TTGTGCCAGACTGTTGGGTT