Insertion junction: CLIP2.019484_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019484
Chromosome:chromosome 12
Location:7530815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556500 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACAGGCTCTGTGTTGGTACTGCTACCTTACCGCGCTCCCGGGTCCCG
Internal bar code:GTGTCTCACTGGTTGGTCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3526
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGGCATCGTACTGTCG
Suggested primer 2:CATTCGCTCAGCCCTCTCAT