Insertion junction: CLIP2.019491_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019491
Chromosome:chromosome 12
Location:5780364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532750 EEP8 (1 of 1) K10772 - AP endonuclease 2 (APEX2); Endonuclease/exonuclease/phosphatase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGACTGAACGTCACCCGTCTGCCGCCGTACCTGCCGCCGTACCTGC
Internal bar code:TGACCTTTGGTTCAACCTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:79
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCCAACGATGTGTTTT
Suggested primer 2:TAACCATGTTCATGCGGCCT