Insertion junction: CLIP2.019493_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019493
Chromosome:chromosome 9
Location:2858113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390750 ELG24 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 24 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGAGCGAGCCCACCTGTGCCATCACGTAACAACCGTCAGCCGTCCAA
Internal bar code:CCGACGAGATCATATATGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGTTTTCGTTGGGTTT
Suggested primer 2:GCACGTACACACACACACAC