Insertion junction: CLIP2.019496_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019496
Chromosome:chromosome 2
Location:1516396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084150 (1 of 60) IPR001611 - Leucine-rich repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGTTGAGCAGCGTGAGCGGGTTGACGGTCTGGTGGTATTCGGGGCGG
Internal bar code:AATGAGGAGGTTCTCTCCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGCTCTCAAGAAGCAGG
Suggested primer 2:CGTACTGTTGCGCGTATTGG