Insertion junction: CLIP2.019497_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019497
Chromosome:chromosome 17
Location:4488056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731150 (1 of 2) PTHR22811//PTHR22811:SF31 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // RE49489P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACAAGACGGGCAGCCGCTACGTGCTGTCGCGGGAGGTGCTGTGGGAC
Internal bar code:AACGGTCACCCTAGTTACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCACCTGTTAGTGGACT
Suggested primer 2:TCACTGTTGCTGCAAATGCC