Insertion junction: CLIP2.019499_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019499
Chromosome:chromosome 1
Location:3944678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025900 (1 of 7) PF00415//PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Regulator of chromosome condensation (RCC1) repeat (RCC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCCATGCCTCACCCTCCTCCTGGCTAACCCGATTGTCCACGCACCC
Internal bar code:GGCTTATGTGGGGGGTGTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTAAACTGGGGTGGGGG
Suggested primer 2:CAGACGGCGTTATCTCCTCC