Insertion junction: CLIP2.019505_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019505
Chromosome:chromosome 9
Location:1562530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399100 OPR42 OctotricoPeptide Repeat protein 42 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCGCGCACCCAGCGGGAGGGCAGCGCCAGCCCTAGCCGCGCCGC
Internal bar code:GCGGGTCTCTGGCGACTTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTTCTGCTTGCACTGGC
Suggested primer 2:CCACACAAATGCACACCTGG