Insertion junction: CLIP2.019507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019507
Chromosome:chromosome 1
Location:8145823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g068012 PPR5,FAP330 (1 of 6) PF01535 - PPR repeat (PPR); PentatricoPeptide Repeat protein 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGAGCACTGTGAAGCTGTTGGGCTTGATGACGCCGCCGCTGTCCTC
Internal bar code:TAAGATAGGGGATATTTGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1941
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAAGGATCACCAGCGCA
Suggested primer 2:CACGACTCTAGAGCCTGCAG