Insertion junction: CLIP2.019516_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019516
Chromosome:chromosome 7
Location:2379495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328550 VPS18 Subunit of the VPS-C complex; (1 of 1) PF05131 - Pep3/Vps18/deep orange family (Pep3_Vps18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGAGCTA
Internal bar code:GAGAGACAGCCGACAATTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGAAGCTGTAGAACCGT
Suggested primer 2:CACCCACACACTCATACCCC