Insertion junction: CLIP2.019520_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019520
Chromosome:chromosome 3
Location:3389057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166600 DIV147 (1 of 1) PTHR13366//PTHR13366:SF0 - MALARIA ANTIGEN-RELATED // HEAT REPEAT-CONTAINING PROTEIN 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATGTGCACTACCCCGCACGGCCTGCACACTGCACACACCCCATACCA
Internal bar code:ATGCGCCCTCGACTGTCAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCGACAGGTTGGACAA
Suggested primer 2:GAAGCACAAGAGCCTAGCCA