Insertion junction: CLIP2.019544_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019544
Chromosome:chromosome 9
Location:6646465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416450 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCCAACGGAACAGAACAGAAAGGACAACGTGGGGCCACGTCCGGT
Internal bar code:TTGTGTTCACATTGCGGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACAAGAGGGGTACGTGC
Suggested primer 2:GATGCGCATGTACCGTTTCC