Insertion junction: CLIP2.019557_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019557
Chromosome:chromosome 14
Location:1078364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614450 Hypothetical protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCACCGCAACCGCTGCCGCCGCCTCGGCCGCCGCCGCCAGCCCCGCC
Internal bar code:AGCATAGTTACAGGTGCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGTGTGTTGCCGCAAA
Suggested primer 2:TTCCCACATTCACCCACCTG