Insertion junction: CLIP2.019557_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019557
Chromosome:chromosome 14
Location:1078365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614450 Hypothetical protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTCGTGGAGGGGGCGGGCGCGGCGCGGCGGCTGGAGCGCCTGCTCTC
Internal bar code:AGATCGTCTCTAATACGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1697
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCACATTCACCCACCTG
Suggested primer 2:TTTGTGTGTGTTGCCGCAAA