Insertion junction: CLIP2.019558_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019558
Chromosome:chromosome 12
Location:7389326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCCACCACCTGCGAGCGACACATCCGTCCATTAAGCGTGCGCGCGC
Internal bar code:AATGCCTGAGGGAGTAGGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2180
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACCAGTAATGGGCTGAC
Suggested primer 2:CCTGAACCCTGTCCCATCAC