Insertion junction: CLIP2.019559_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019559
Chromosome:chromosome 1
Location:4273375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800084 (1 of 7) PF00628//PF00665 - PHD-finger (PHD) // Integrase core domain (rve) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCGACACCGCACGCCTCCGTGCGCGAGTGGAGCAGTTGGTGCCGTG
Internal bar code:ATGTTGACTATGTCAAGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1865
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACTGCCCGTACAACTGA
Suggested primer 2:CCTCAAGCTTCAACCCGCTA