Insertion junction: CLIP2.019560_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019560
Chromosome:chromosome 12
Location:4657008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522300 (1 of 1) IPR001611//IPR002048//IPR003590//IPR008907//IPR011992 - Leucine-rich repeat // EF-hand domain // Leucine-rich repeat, ribonuclease inhibitor subtype // P25-alpha // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGCGGTGCTTGCAATGCAGCGAGGCACTTTGCGCACGGCCAGCCTTCA
Internal bar code:GATAGAGGTTTATTATCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTCAGACGGTGCATTCC
Suggested primer 2:ATTCCACGCTGTCAGCATCA