Insertion junction: CLIP2.019561_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019561
Chromosome:chromosome 1
Location:1808037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010150 (1 of 3) IPR006073//IPR027417 - GTP binding domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGGGACAAAACGCTTGCGTTTGATTCAATTGCGCTGGTACAATATG
Internal bar code:ATCTGTTGAAATTTCCGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1867
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTAGCCACCCCTCCTCAT
Suggested primer 2:ACACCCTGCTAATCCTTGCC