Insertion junction: CLIP2.019572_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019572
Chromosome:chromosome 15
Location:1299736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639504 (1 of 3) PF13637//PF13920 - Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGACTACTGTAGGTGACTACCGTAGGTGACTACGGTATTATGACTCAT
Internal bar code:TTTTCACCGCGTTCGTTAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1180
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGGTTAGAGGGAATCG
Suggested primer 2:TAGGTTGGAAGGAGGAGGGG