Insertion junction: CLIP2.019580_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019580
Chromosome:chromosome 4
Location:2003263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800465 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTTGCTGACGCTGGCAACGCCCCAGTCCGGCACCGCCACGTTCAGAA
Internal bar code:TATAACCGGTTGCGGAAACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACTGCTTCTATTTCCGC
Suggested primer 2:GGGTCGTTGGATTTCGGACT