Insertion junction: CLIP2.019591_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019591
Chromosome:chromosome 2
Location:2804694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACACTCATCACAAAGGGGTACAAAGGCGATGCATCGGTGTTGAATTCG
Internal bar code:GTGTGCCTTTTGAGGTTGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1485
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTAAGAACCACCACGCT
Suggested primer 2:AGCAATCCACTCTCAAGCCC