Insertion junction: CLIP2.019598_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019598
Chromosome:chromosome 12
Location:6136730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535350 (1 of 1) IPR011044//IPR017986 - Quinoprotein amine dehydrogenase, beta chain-like // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACCCTACCTCTGCAAACTTGTGACTTGCTGACTCGATCGTGCCCGGG
Internal bar code:ATATCTTTGCTATTTGAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAAGGGAGGGGGAGTTG
Suggested primer 2:CTCTTTGCGTCCCCTCCTAC