Insertion junction: CLIP2.019602_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019602
Chromosome:chromosome 3
Location:1863555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154600 (1 of 2) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACATGTTTACTCGTGTGTTCTTGTACGAAGGTGTGTACATGCACGTG
Internal bar code:CTAGTAACGCTCGACCTAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TACGACACGACACAAGCACA
Suggested primer 2:CTGCATGAGCCTACCTAGCC