Insertion junction: CLIP2.019603_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019603
Chromosome:chromosome 3
Location:5835002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188100 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCCGCCGCCGCCGCCGTCACTGCCGCCGGTGGCCAGTGCAATGAT
Internal bar code:GCGTGGATCCCATATCGTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2049
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTAACCTGTGAGCAGTGG
Suggested primer 2:CTTCAATCCCACCCATGCCT