Insertion junction: CLIP2.019619_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019619
Chromosome:chromosome 2
Location:6981034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389430 TSF3 (1 of 1) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT; Phenylalanyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTTCTAAAAACCTCTGCCATGTATGAAGTACGCCCCGATCCCCTTCC
Internal bar code:CATTCATGTACACTGCGGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1617
LEAP-Seq percent confirming:37.931
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGGTGGCATATGGCGG
Suggested primer 2:GGTGCGAGACTGTGGAATGA