Insertion junction: CLIP2.019619_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019619
Chromosome:chromosome 2
Location:6981034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389430 TSF3 (1 of 1) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT; Phenylalanyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTATAACCCTGGTGCAGGGGCCACACAGACGTTTGTGTACATTAAAA
Internal bar code:TCTATTAACTCTTATTCGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCGAGACTGTGGAATGA
Suggested primer 2:CAAATGGTGGCATATGGCGG