Insertion junction: CLIP2.019621_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019621
Chromosome:chromosome 14
Location:690506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612350 (1 of 25) IPR001965//IPR011011//IPR013083//IPR019787 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, PHD-finger CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGCGGACTGCAGCAGCACGGGTGGCGGTGACGGCGGGGCGCTAGCG
Internal bar code:TGGTTTGGAGACCTTTTAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3831
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCTTGGCAGCTCATCAA
Suggested primer 2:ATGTGCACAGAAGCCCGTT