Insertion junction: CLIP2.019637_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019637
Chromosome:chromosome 1
Location:5367655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037950 (1 of 29) PF13637 - Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTTGCGTCACCGGCCTTCGGCGCACCGCTGCTGCTACTGTGCTCAC
Internal bar code:TGTGCCTAGAATTCGTGTCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1434
LEAP-Seq percent confirming:55.2632
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGTTTTGGGGCGTATG
Suggested primer 2:AGCTACGAGCAGAGTCCTCA