Insertion junction: CLIP2.019641_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019641
Chromosome:chromosome 12
Location:3337511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498600 EEF1,EEF1A1 (1 of 3) K03231 - elongation factor 1-alpha (EEF1A); Eukaryotic translation elongation factor 1 alpha CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACGGGGTTCTCCATCTTCTTGCCGCCGGTCTCCTTGCCGACCTTCCA
Internal bar code:AGTAACGACCTGCGTGGTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1565
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGGGTGTCGGTGATGTG
Suggested primer 2:CGGTACTGGATCTGAGACGC