Insertion junction: CLIP2.019646_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019646
Chromosome:chromosome 3
Location:5149532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800343 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGCCTGACCGAAGTAAGTGAGTGAGTGGGTGAAGATGACGAGTGCG
Internal bar code:TTTTCCTCATCGGCCATGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4880
LEAP-Seq percent confirming:96.3303
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACCACGCACCATGCTAT
Suggested primer 2:CGTTATTACCAAGCAGGCGC