Insertion junction: CLIP2.019648_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019648
Chromosome:chromosome 8
Location:4082849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383050 (1 of 1) 3.7.1.14 - 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTGCCTGGGAGTCGCCCTCGTGCGCTGTGCACTGGTGCTCACCGCC
Internal bar code:TGATGGATAATCTTAAGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCTCTCCACCCCATTA
Suggested primer 2:CCATGCAACGCACATAGTCG