Insertion junction: CLIP2.019653_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019653
Chromosome:chromosome 5
Location:3497821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCTATGGGCTAGCTTCTGAGGCGGGTGGGGGTTTGCAACGAAATTAG
Internal bar code:CCCCTCGTTCGGCTCGGGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTCAGGCAACCGTTTC
Suggested primer 2:CATTTGTCGAGGCGTTAGCG