Insertion junction: CLIP2.019683_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019683
Chromosome:chromosome 13
Location:1243003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570400 (1 of 3) 3.1.1.14 - Chlorophyllase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGATAACAACAGCGCGGGGGCACAAGTTTGCTACGTTGGTTTGATGT
Internal bar code:AGAAAACGCTGCAGCTGCACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCACTGCTTGGCTCTGA
Suggested primer 2:TGCATGCATGTGTGTTGGTG