Insertion junction: CLIP2.019688_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019688
Chromosome:chromosome 5
Location:1106405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248100 ANK1 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGGGAAAGCGCTGTCCCGATGGGGTCGATTTCTCCCCGTCCTTGGCA
Internal bar code:TTTTCGTCTTCCGTGGGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3576
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCAGTGCCTCTCCTCT
Suggested primer 2:GAGATTGGGTTTGGGGAGGG