Insertion junction: CLIP2.019704_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019704
Chromosome:chromosome 6
Location:7309414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299450 3'UTR_intron
Cre06.g800733 (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATTCGCCCTCGCCCCGGCCGCACCGTGGTCGTCGTCCGTCACCTTGT
Internal bar code:AGTTTGGTGCCTGTAAAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTTCCAGCCGAGTTTGC
Suggested primer 2:TTCCCTACACGCCAAAGGAC