Insertion junction: CLIP2.019704_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019704
Chromosome:chromosome 6
Location:7309415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299450 3'UTR_intron
Cre06.g800733 (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGGGAGGGTGGCATGCGGGAGACATTGCGGAATTGCCGTTCCATCA
Internal bar code:AGTTTGGTGCCTGTAAAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTACACGCCAAAGGAC
Suggested primer 2:CTGTTTCCAGCCGAGTTTGC