Insertion junction: CLIP2.019713_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019713
Chromosome:chromosome 6
Location:3555411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278124 (1 of 1) PTHR12894//PTHR12894:SF10 - CNH DOMAIN CONTAINING // VAM6/VPS39-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGAAAAGCGGCACAGGGGGGGCGTGTGTGTGTGTGTGGGGGGGGGGG
Internal bar code:TGGACGCGCGACTACACGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTTCTTCACACACGCG
Suggested primer 2:AGGGGTATGTAGGGGCATGT